##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R1_003.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.832793 34.0 31.0 34.0 31.0 34.0 2 33.0759075 34.0 31.0 34.0 31.0 34.0 3 33.11425275 34.0 33.0 34.0 31.0 34.0 4 36.469555 37.0 37.0 37.0 35.0 37.0 5 36.4039055 37.0 37.0 37.0 35.0 37.0 6 36.37703925 37.0 37.0 37.0 35.0 37.0 7 36.37034175 37.0 37.0 37.0 35.0 37.0 8 36.3502045 37.0 37.0 37.0 35.0 37.0 9 38.14845825 39.0 39.0 39.0 37.0 39.0 10-14 38.412571650000004 39.4 39.0 39.4 37.0 39.4 15-19 39.5401872 41.0 39.8 41.0 37.0 41.0 20-24 39.288906299999994 40.8 39.0 41.0 36.0 41.0 25-29 38.771337599999995 40.0 38.2 41.0 34.8 41.0 30-34 37.95100675 40.0 37.0 41.0 33.4 41.0 35-39 36.8786082 38.6 35.0 40.4 32.2 41.0 40-44 35.97289685 36.6 35.0 40.0 31.4 41.0 45-49 35.24778239999999 35.0 35.0 38.4 31.4 41.0 50-54 34.332650349999994 35.0 34.4 36.2 30.6 39.6 55-59 33.647392 35.0 34.0 35.0 30.0 38.0 60-64 33.13671855 35.0 33.0 35.0 28.4 36.0 65-69 32.691412500000006 35.0 33.0 35.0 28.2 35.0 70-74 32.357439449999994 35.0 33.0 35.0 26.4 35.0 75-79 31.615072750000003 34.4 32.2 35.0 26.0 35.0 80-84 31.907806049999998 35.0 33.0 35.0 26.6 35.0 85-89 31.48994915 35.0 33.0 35.0 24.2 35.0 90-94 30.962544100000002 35.0 32.2 35.0 22.8 35.0 95-99 30.270297600000003 34.6 31.0 35.0 15.0 35.0 100-101 28.842841749999998 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 52.0 3 14.0 4 54.0 5 158.0 6 361.0 7 1138.0 8 2656.0 9 4309.0 10 5440.0 11 6250.0 12 6371.0 13 6770.0 14 7309.0 15 8032.0 16 8923.0 17 9642.0 18 10675.0 19 11139.0 20 12089.0 21 13244.0 22 15438.0 23 18575.0 24 22257.0 25 27262.0 26 34076.0 27 41726.0 28 51431.0 29 63053.0 30 78182.0 31 100357.0 32 131856.0 33 184752.0 34 306206.0 35 718364.0 36 1339719.0 37 624076.0 38 114914.0 39 13089.0 40 41.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.63109251303552 19.02737820974742 17.94010588434733 28.401423392869734 2 31.538525 22.3406 20.409125 25.71175 3 29.223300000000002 20.471575 20.893225 29.411900000000003 4 31.324425 19.32395 19.43595 29.915675000000004 5 31.4581 19.1936 19.364075 29.984225 6 30.83765 18.54585 18.0883 32.5282 7 32.676825 18.511125 18.39725 30.414799999999996 8 30.3021 19.02845 19.2151 31.454349999999998 9 30.918200000000002 18.087425 18.99995 31.994425 10-14 31.09331853064594 18.86245640743897 18.946741525438135 31.09748353647695 15-19 31.191075 18.608995 18.77887 31.42106 20-24 31.1236713095156 18.671594767583635 18.811415739339388 31.393318183561377 25-29 31.25461063837085 18.77307444191588 18.745019360556146 31.22729555915712 30-34 31.35724398641111 18.599975502528405 18.64216559250057 31.400614918559917 35-39 31.279854492580583 18.641540355920284 18.717882643211425 31.360722508287708 40-44 31.3649583543273 18.70116481682289 18.65650436351929 31.277372465330522 45-49 31.431615 18.517985 18.57371 31.47669 50-54 31.318810496611093 18.618623483562782 18.65538908284205 31.407176936984072 55-59 31.412295 18.653885 18.63167 31.30215 60-64 31.467979280622743 18.52101392526982 18.53631641957639 31.47469037453105 65-69 31.354994330520576 18.61156091698485 18.629304764738233 31.404139987756345 70-74 31.455485 18.645815 18.584065 31.314635000000003 75-79 31.492035 18.50526 18.515604999999997 31.4871 80-84 31.370705103790446 18.58735029688236 18.6316575144586 31.4102870848686 85-89 31.48093121001373 18.613503597364065 18.586214318405126 31.31935087421708 90-94 31.577464366091522 18.456364091022756 18.495418854713677 31.470752688172045 95-99 31.503006483002434 18.534176398670894 18.560878468081278 31.40193865024539 100-101 31.812731767768852 18.57054677755769 18.41077029962527 31.205951155048183 >>END_MODULE >>Per base GC content warn #Base %GC 1 63.03251590590525 2 57.250274999999995 3 58.6352 4 61.2401 5 61.442325 6 63.36585 7 63.09162499999999 8 61.756449999999994 9 62.912625 10-14 62.190802067122895 15-19 62.612135 20-24 62.51698949307698 25-29 62.48190619752797 30-34 62.75785890497102 35-39 62.64057700086829 40-44 62.64233081965782 45-49 62.908305 50-54 62.725987433595165 55-59 62.714445 60-64 62.94266965515379 65-69 62.75913431827692 70-74 62.77012 75-79 62.979135 80-84 62.78099218865905 85-89 62.80028208423081 90-94 63.04821705426357 95-99 62.90494513324782 100-101 63.018682922817035 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 11.0 1 7.5 2 4.5 3 4.0 4 3.5 5 5.0 6 8.5 7 13.0 8 14.5 9 18.5 10 34.5 11 52.0 12 59.0 13 65.0 14 93.0 15 130.0 16 169.5 17 207.5 18 254.5 19 321.0 20 410.5 21 503.5 22 615.5 23 793.5 24 993.5 25 1265.0 26 1628.0 27 2034.5 28 2515.5 29 3074.0 30 3666.5 31 4313.5 32 5075.5 33 5902.0 34 6756.0 35 7615.5 36 8452.0 37 9327.0 38 10267.5 39 11131.5 40 11948.5 41 12822.0 42 13890.5 43 15372.5 44 17239.0 45 19661.5 46 22644.0 47 26228.0 48 30939.0 49 36824.0 50 43422.5 51 51112.5 52 59848.0 53 69299.0 54 79214.5 55 89788.0 56 100963.0 57 111698.0 58 122974.0 59 135225.5 60 147597.5 61 159692.0 62 171353.0 63 182564.0 64 192556.5 65 200515.5 66 204876.0 67 205536.5 68 202373.5 69 194840.0 70 182670.5 71 165812.5 72 146104.5 73 124856.0 74 102808.0 75 80965.5 76 60404.0 77 42517.5 78 28356.0 79 17755.5 80 10557.5 81 6111.0 82 3533.5 83 2166.0 84 1402.0 85 945.5 86 661.0 87 473.5 88 333.5 89 232.5 90 174.0 91 118.5 92 81.0 93 56.5 94 32.0 95 18.0 96 11.0 97 7.5 98 4.0 99 1.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01355 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 1.4E-4 15-19 0.0 20-24 6.950000000000001E-4 25-29 2.9E-4 30-34 0.07132 35-39 0.016095 40-44 0.0010149999999999998 45-49 0.0 50-54 0.00163 55-59 0.0 60-64 0.016300000000000002 65-69 0.021685000000000003 70-74 0.0 75-79 0.0 80-84 0.005005 85-89 0.01568 90-94 0.025 95-99 0.00775 100-101 9.249999999999999E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.1614701280263136 #Duplication Level Relative count 1 100.0 2 0.13819762260031845 3 0.0025035801195709864 4 0.0 5 5.007160239141973E-4 6 0.0 7 0.0 8 0.0010014320478283947 9 0.0 10++ 0.0010014320478283947 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 283650 3.2076654 3.529024 80-84 AAAAA 276335 3.1210337 3.6697595 1 GATCG 1276860 3.0628533 4.3052883 1 CGATC 1269925 3.0605419 3.6231155 1 >>END_MODULE