##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002002_Airport_GTGGCC_L002_R1_002.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.66311775 34.0 31.0 34.0 31.0 34.0 2 32.90009575 34.0 31.0 34.0 31.0 34.0 3 32.946783 34.0 31.0 34.0 31.0 34.0 4 36.3611075 37.0 37.0 37.0 35.0 37.0 5 36.28728275 37.0 37.0 37.0 35.0 37.0 6 36.236796 37.0 37.0 37.0 35.0 37.0 7 36.235792 37.0 37.0 37.0 35.0 37.0 8 36.21874375 37.0 37.0 37.0 35.0 37.0 9 37.99856825 39.0 38.0 39.0 35.0 39.0 10-14 38.2497275 39.4 38.2 39.4 35.2 39.4 15-19 39.38758595 41.0 39.0 41.0 36.0 41.0 20-24 39.1632922 40.6 39.0 41.0 35.6 41.0 25-29 38.71095045 40.0 38.0 41.0 34.8 41.0 30-34 37.96102355 39.8 36.8 41.0 33.2 41.0 35-39 36.927030249999994 38.6 35.0 40.4 32.4 41.0 40-44 36.032259599999996 36.4 35.0 39.8 31.4 41.0 45-49 35.311355750000004 35.0 35.0 38.4 31.4 41.0 50-54 34.47129365 35.0 34.6 36.2 31.0 39.6 55-59 33.842875649999996 35.0 34.0 35.0 30.2 38.0 60-64 33.39249495 35.0 33.4 35.0 29.8 36.0 65-69 33.03122495 35.0 33.0 35.0 29.0 35.0 70-74 32.799368900000005 35.0 33.0 35.0 29.0 35.0 75-79 32.1396727 34.4 32.4 35.0 26.8 35.0 80-84 32.432321650000006 35.0 33.0 35.0 27.2 35.0 85-89 32.14748355 35.0 33.0 35.0 27.0 35.0 90-94 31.765930400000002 35.0 33.0 35.0 26.0 35.0 95-99 31.28821155 35.0 33.0 35.0 24.0 35.0 100-101 30.175905 34.0 31.0 35.0 20.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 57.0 3 14.0 4 60.0 5 128.0 6 386.0 7 998.0 8 2170.0 9 3288.0 10 4136.0 11 4533.0 12 4985.0 13 4953.0 14 5360.0 15 5916.0 16 6487.0 17 7179.0 18 7799.0 19 8361.0 20 9197.0 21 10511.0 22 12662.0 23 15455.0 24 19682.0 25 25099.0 26 31709.0 27 40080.0 28 50163.0 29 62137.0 30 77792.0 31 98629.0 32 129296.0 33 176030.0 34 279339.0 35 673209.0 36 1415658.0 37 674266.0 38 118677.0 39 13566.0 40 33.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 34.54909926912466 19.144711515732745 18.046534989540522 28.25965422560207 2 31.393325 22.41915 20.4816 25.705925 3 29.087950000000003 20.53885 21.0114 29.3618 4 31.256850000000004 19.407425 19.510775 29.82495 5 31.429800000000004 19.20265 19.336724999999998 30.030825 6 30.86235 18.5687 18.043699999999998 32.52525 7 32.639649999999996 18.500325 18.448800000000002 30.411224999999998 8 30.261525 19.06495 19.16985 31.503674999999998 9 30.926724999999998 18.1149 18.981675 31.9767 10-14 31.104081507754255 18.89250846905759 18.91560362610466 31.0878063970835 15-19 31.19266 18.62473 18.754395 31.428214999999998 20-24 31.131477070145923 18.683796285786944 18.813312438480704 31.37141420558643 25-29 31.253788440341328 18.7585090688818 18.764974073730556 31.222728417046312 30-34 31.334269286374823 18.610860016398185 18.65625213830657 31.398618558920425 35-39 31.24931932088601 18.671324370287437 18.7304140679184 31.34894224090815 40-44 31.352382028573047 18.702918054377083 18.646782970174456 31.29791694687542 45-49 31.402780000000003 18.559639999999998 18.596845000000002 31.440734999999997 50-54 31.27237300523334 18.63919126244064 18.70369362000181 31.384742112324204 55-59 31.38122 18.665495 18.65895 31.294335 60-64 31.431513773414245 18.540857988556258 18.570206428193384 31.457421809836113 65-69 31.29644425199554 18.63680899356696 18.690421426930843 31.37632532750666 70-74 31.384384999999998 18.690665 18.645205 31.279745 75-79 31.42082 18.55853 18.574735 31.445915000000003 80-84 31.32167022346849 18.647143591456476 18.678459781471695 31.352726403603338 85-89 31.415941328626733 18.683093416392175 18.63259844768725 31.26836680729384 90-94 31.456724596044953 18.544095546167704 18.555327493787424 31.44385236399992 95-99 31.366165264578918 18.613278693229745 18.65478079738643 31.36577524480491 100-101 31.562565781282892 18.708809354404675 18.572659286329642 31.15596557798279 >>END_MODULE >>Per base GC content warn #Base %GC 1 62.80875349472673 2 57.09925 3 58.44975 4 61.081799999999994 5 61.460625 6 63.3876 7 63.050875 8 61.7652 9 62.903425 10-14 62.19188790483775 15-19 62.620875 20-24 62.50289127573235 25-29 62.476516857387644 30-34 62.73288784529525 35-39 62.59826156179417 40-44 62.65029897544846 45-49 62.843515000000004 50-54 62.65711511755755 55-59 62.675555 60-64 62.88893558325036 65-69 62.672769579502194 70-74 62.66412999999999 75-79 62.866735 80-84 62.67439662707183 85-89 62.684308135920574 90-94 62.90057696004487 95-99 62.73194050938382 100-101 62.71853135926568 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 6.0 1 5.5 2 5.5 3 5.5 4 8.5 5 10.0 6 9.5 7 11.5 8 15.0 9 24.0 10 29.0 11 43.0 12 58.0 13 77.0 14 97.0 15 113.5 16 156.0 17 205.5 18 277.0 19 329.5 20 414.5 21 540.0 22 658.0 23 822.5 24 1046.0 25 1334.5 26 1636.5 27 1975.5 28 2406.0 29 2962.0 30 3666.5 31 4331.5 32 4997.5 33 5878.0 34 6722.5 35 7474.5 36 8507.0 37 9436.0 38 10196.5 39 11092.0 40 11974.5 41 12941.5 42 14056.5 43 15366.0 44 17191.0 45 19567.5 46 22544.0 47 26356.0 48 30936.5 49 36525.0 50 43435.5 51 51287.5 52 60058.0 53 69386.0 54 79636.5 55 90332.0 56 101258.5 57 112473.0 58 123770.5 59 135823.0 60 147794.5 61 160111.0 62 172060.5 63 183326.0 64 193692.5 65 201462.0 66 206233.0 67 207333.0 68 204348.5 69 195996.5 70 183213.5 71 166990.5 72 147475.0 73 125400.0 74 102009.0 75 79553.5 76 58730.0 77 40750.5 78 26437.5 79 15871.5 80 8895.0 81 4672.0 82 2325.5 83 1181.5 84 608.5 85 356.0 86 218.0 87 141.0 88 102.5 89 69.5 90 51.0 91 38.0 92 22.0 93 10.0 94 7.0 95 5.5 96 4.5 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.054775 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 6.8E-4 15-19 0.0 20-24 8.9E-4 25-29 7.500000000000001E-5 30-34 0.037720000000000004 35-39 0.007949999999999999 40-44 1.5000000000000001E-4 45-49 0.0 50-54 0.0036550000000000003 55-59 0.0 60-64 0.01172 65-69 0.013865 70-74 0.0 75-79 0.0 80-84 0.0038000000000000004 85-89 0.009840000000000002 90-94 0.01734 95-99 0.00507 100-101 4.9999999999999996E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.1499775033744867 #Duplication Level Relative count 1 100.0 2 0.13117708907024483 3 0.002002703649927402 4 5.006759124818505E-4 5 0.0 6 0.0 7 5.006759124818505E-4 8 0.0 9 0.0 10++ 0.001001351824963701 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 278460 3.1164975 3.7196567 1 TTTTT 277650 3.108983 3.3774815 10-14 GATCG 1277670 3.0651467 4.3346148 1 CGATC 1269695 3.0567422 3.5088727 1 >>END_MODULE